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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4486067 chr6:28650523 T/C BTN3A2 chr6:26365387-26378548:+ -0.45 -7.37 7.33E-13 Box Plot
THCA rs4489075 chr5:46019005 G/T LOC647121 chr1:121260910-121313686:+ 0.38 8.16 2.93E-15 Box Plot
THCA rs4490592 chr5:45963019 T/C LOC647121 chr1:121260910-121313686:+ 0.36 7.6 1.63E-13 Box Plot
THCA rs4492122 chr5:45983054 A/C LOC647121 chr1:121260910-121313686:+ 0.38 8.05 6.77E-15 Box Plot
THCA rs4492123 chr5:46073004 A/T LOC647121 chr1:121260910-121313686:+ 0.35 7.47 3.73E-13 Box Plot
THCA rs4492125 chr5:45965439 G/T LOC647121 chr1:121260910-121313686:+ 0.38 7.94 1.49E-14 Box Plot
THCA rs4492445 chr9:72000164 T/C SRPK3 chrX:153041867-153051187:+ -0.36 -6.04 3.02E-9 Box Plot
THCA rs4493309 chr2:132274113 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.14 3.39E-12 Box Plot
THCA rs4498260 chr5:46079337 G/A LOC647121 chr1:121260910-121313686:+ -0.38 -8.17 2.76E-15 Box Plot
THCA rs4499842 chr5:46034492 C/T LOC647121 chr1:121260910-121313686:+ 0.38 8.1 4.63E-15 Box Plot
THCA rs4501347 chr5:45974881 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.05 6.79E-15 Box Plot
THCA rs4501904 chr10:88859356 C/T FAM35B chr10:46897641-46939143:+ 0.34 6.69 6.21E-11 Box Plot
THCA rs4502836 chr5:45956719 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.77 4.7E-14 Box Plot
THCA rs4502839 chr5:45658794 G/C LOC647121 chr1:121260910-121313686:+ 0.37 7.96 1.26E-14 Box Plot
THCA rs4503102 chr8:10155663 G/T SGK223 chr8:8175258-8244008:- -0.34 -6.42 3.28E-10 Box Plot